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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs57230438 chr8:11113030 CA/C SGK223 chr8:8175258-8244008:- 0.37 7.37 7.35E-13 Box Plot
THCA rs57232631 chr5:170826421 A/G CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs572664 chr5:49569618 T/C LOC647121 chr1:121260910-121313686:+ -0.36 -7.8 3.97E-14 Box Plot
THCA rs57299032 chr5:45998264 A/G LOC647121 chr1:121260910-121313686:+ 0.38 7.98 1.07E-14 Box Plot
THCA rs57302724 chr2:132191955 T/A CCDC74B chr2:130896860-130902707:- 0.37 6.56 1.42E-10 Box Plot
THCA rs57335910 chr8:139179130 C/T RSU1 chr10:16632610-16859527:- 0.6 5.88 7.83E-9 Box Plot
THCA rs57346483 chr1:151228548 C/CG PIPSL chr10:95717948-95721297:- 0.35 6.24 9.86E-10 Box Plot
THCA rs57354961 chr2:132241520 A/G TUBA3E chr2:130949316-130956034:- 0.52 5.98 4.45E-9 Box Plot
THCA rs573550 chr17:18288026 A/G LOC162632 chr17:16614993-16707819:+ 0.45 7.8 3.88E-14 Box Plot
THCA rs57356272 chr8:11797180 G/A SGK223 chr8:8175258-8244008:- -0.46 -8.6 1.13E-16 Box Plot
THCA rs57407363 chr5:46073947 G/T LOC647121 chr1:121260910-121313686:+ -0.38 -8.08 5.33E-15 Box Plot
THCA rs57410636 chr8:10263345 TCA/T SGK223 chr8:8175258-8244008:- 0.31 5.88 7.74E-9 Box Plot
THCA rs57440165 chr6:26843517 A/C RNF5P1 chr8:38458179-38458718:- 0.75 6.54 1.54E-10 Box Plot
THCA rs57440165 chr6:26843517 A/C ZFP57 chr6:29640169-29648887:- 0.83 7.65 1.15E-13 Box Plot
THCA rs57440165 chr6:26843517 A/C ZNF389 chr6:28129551-28137375:+ -0.62 -6.04 3.08E-9 Box Plot